EnhancerDB
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  3. rs143665842[chr3:55658404]
Enhancers that have rs143665842[chr3:55658404]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 55647472 55668015 enh7230
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr3 55658337 55658755 vista41050
VISTA
Transcript factors that have rs143665842[chr3:55658404]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 55658207 55658637 CTCF UCSC Txn Factor no Conserved 108529320
chr3 55658370 55658626 SPI1 UCSC Txn Factor no Conserved 108529321
chr3 55658401 55658416 ZIC3 JASPAR yes 2532863
chr3 55658401 55658416 ZIC4 JASPAR yes 2532864
chr3 55658401 55658416 ZIC3 JASPAR yes 70988179
chr3 55658401 55658416 ZIC4 JASPAR yes 70988180
chr3 55658402 55658416 ZIC1 JASPAR yes 2532865
chr3 55658402 55658416 ZIC1 JASPAR yes 70988181
Genes associated with rs143665842[chr3:55658404], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More