EnhancerDB
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  3. rs143678592[chr6:41696414]
Enhancers that have rs143678592[chr6:41696414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 41696174 41696539 vista51932
VISTA
Transcript factors that have rs143678592[chr6:41696414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41696413 41696433 RREB1 JASPAR yes 70363342
chr6 41696413 41696433 RREB1 JASPAR yes 101670021
chr6 41696414 41696424 SP1 JASPAR yes 70363343
chr6 41696414 41696424 SP1 JASPAR yes 101670022
chr6 41696414 41696434 RREB1 JASPAR yes 70363344
chr6 41696414 41696434 RREB1 JASPAR yes 101670023
chr6 41696414 41696435 ZNF263 JASPAR yes 70363345
chr6 41696414 41696435 ZNF263 JASPAR yes 101670024
Genes associated with rs143678592[chr6:41696414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More