EnhancerDB
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  3. rs143680196[chr5:150005827]
Enhancers that have rs143680196[chr5:150005827]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149998886 150027071 enh22720
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143680196[chr5:150005827]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 150005813 150005828 TFAP2A JASPAR yes 66894972
chr5 150005813 150005828 TFAP2C JASPAR yes 66894973
chr5 150005816 150005828 TFAP2A JASPAR yes 66894974
chr5 150005816 150005828 TFAP2B JASPAR yes 66894975
chr5 150005816 150005828 TFAP2C JASPAR yes 66894976
chr5 150005818 150005829 EBF1 JASPAR yes 66894977
Genes associated with rs143680196[chr5:150005827], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More