EnhancerDB
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  3. rs143705342[chr17:79699244]
Enhancers that have rs143705342[chr17:79699244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs143705342[chr17:79699244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79697872 79702757 TCF7L2 GTRD no Colon (HCT116) 21798308
chr17 79697872 79702757 TCF7L2 GTRD no Colon (HCT116) 108310128
chr17 79697976 79699273 ZBTB33 GTRD no Lung (A549) 108310130
chr17 79698203 79702705 TCF7L2 GTRD no Colon (HCT116) 21798310
chr17 79698203 79702705 TCF7L2 GTRD no Colon (HCT116) 108310134
chr17 79698423 79701576 TCF7L2 GTRD no Colon (HCT116) 21798312
chr17 79698423 79701576 TCF7L2 GTRD no Colon (HCT116) 108310138
chr17 79698474 79700278 ZNF143 GTRD no Epithelial (MCF-7) 21798313
chr17 79698493 79701154 TCF7L2 GTRD no Colon (HCT116) 21798314
chr17 79698680 79700810 TCF7L2 GTRD no Colon (HCT116) 21798315
chr17 79698758 79700675 TCF7L2 GTRD no Colon (HCT116) 21798316
chr17 79698846 79701373 TCF7L2 GTRD no Colon (HCT116) 21798317
chr17 79698847 79700434 ZNF143 GTRD no Epithelial (MCF-7) 21798318
chr17 79698920 79699437 TCF7L2 GTRD no Colon (HCT116) 21798319
chr17 79698921 79702115 TCF7L2 GTRD no Colon (HCT116) 21798320
chr17 79699236 79699251 STAT1 JASPAR yes 56340538
chr17 79699237 79699601 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21798321
chr17 79699238 79699249 STAT1 JASPAR yes 56340539
chr17 79699238 79699249 STAT3 JASPAR yes 56340540
chr17 79699243 79699248 ETS2 TRANSFAC yes 56340541
Genes associated with rs143705342[chr17:79699244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More