EnhancerDB
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  3. rs143748200[chr17:39828181]
Enhancers that have rs143748200[chr17:39828181]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs143748200[chr17:39828181]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39827554 39828791 ZNF274 GTRD no Blood (GM12878) 21758223
chr17 39827554 39828791 ZNF274 GTRD no Blood (GM12878) 108259464
chr17 39828099 39828811 ZNF274 GTRD no Blood (GM12878) 21758224
chr17 39828099 39828811 ZNF274 GTRD no Blood (GM12878) 108259465
chr17 39828130 39828806 ZNF274 GTRD no Liver (HepG2) 108259466
chr17 39828142 39828877 ZNF274 GTRD no Liver (HepG2) 108259467
chr17 39828145 39828934 ZNF274 GTRD no Liver (HepG2) 108259468
chr17 39828166 39828678 ZNF274 GTRD no Liver (HepG2) 108259469
chr17 39828171 39828182 FOSL2 JASPAR yes 54271350
chr17 39828172 39828801 ZNF274 GTRD no Liver (HepG2) 108259470
chr17 39828180 39828194 SPI1 JASPAR yes 54271351
Genes associated with rs143748200[chr17:39828181], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 39845137 39848920 + EIF1 ENSG00000173812.6 39845137 16956 Liver 0.172921 15837