EnhancerDB
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  3. rs143754925[chr12:117356941]
Enhancers that have rs143754925[chr12:117356941]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117350745 117365303 enh2616
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143754925[chr12:117356941]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117356924 117356945 IRF1 JASPAR yes 124032348
chr12 117356926 117356941 IRF9 JASPAR yes 124032349
chr12 117356927 117356941 IRF7 JASPAR yes 124032350
chr12 117356928 117356942 STAT1 JASPAR yes 124032351
chr12 117356928 117356943 STAT2 JASPAR yes 124032352
chr12 117356929 117356941 IRF1 JASPAR yes 124032353
Genes associated with rs143754925[chr12:117356941], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More