EnhancerDB
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  3. rs143778225[chr2:238370557]
Enhancers that have rs143778225[chr2:238370557]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238336205 238371002 enh19393
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143778225[chr2:238370557]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238370553 238370568 RUNX2 JASPAR yes 82112403
chr2 238370555 238370565 MAX JASPAR yes 82112404
chr2 238370555 238370566 USF2 JASPAR yes 82112405
chr2 238370556 238370566 TFE3 JASPAR yes 82112406
chr2 238370556 238370566 TFEB JASPAR yes 82112407
chr2 238370556 238370566 TFEC JASPAR yes 82112408
chr2 238370556 238370567 USF1 JASPAR yes 82112409
Genes associated with rs143778225[chr2:238370557], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More