EnhancerDB
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  3. rs143806325[chr19:12894788]
Enhancers that have rs143806325[chr19:12894788]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 12880762 12907555 enh5013
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
chr19 12894545 12895330 vista28654
VISTA
Transcript factors that have rs143806325[chr19:12894788]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 12894497 12894893 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849882
chr19 12894497 12894893 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386314
chr19 12894577 12894887 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108386316
chr19 12894581 12894845 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386317
chr19 12894582 12895245 EP300 UCSC Txn Factor no Conserved 108386318
chr19 12894585 12894861 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386319
chr19 12894596 12894966 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849883
chr19 12894596 12894966 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386320
chr19 12894629 12895052 NR3C1 UCSC Txn Factor no Conserved 108386321
chr19 12894651 12895245 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386323
chr19 12894689 12895153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849884
chr19 12894689 12895153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386324
chr19 12894732 12895218 TCF12 UCSC Txn Factor no Conserved 108386325
chr19 12894732 12895218 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386326
chr19 12894735 12894979 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386327
chr19 12894779 12894799 RREB1 JASPAR yes 70806017
chr19 12894779 12894799 RREB1 JASPAR yes 112493676
chr19 12894780 12894801 ZNF263 JASPAR yes 70806018
chr19 12894780 12894801 ZNF263 JASPAR yes 112493677
chr19 12894781 12894792 E2F4 JASPAR yes 70806019
chr19 12894781 12894792 E2F4 JASPAR yes 112493678
chr19 12894783 12894793 SP1 JASPAR yes 70806020
chr19 12894783 12894793 SP1 JASPAR yes 112493679
chr19 12894784 12894790 SP1 TRANSFAC yes 70806021
chr19 12894784 12894790 SP1 TRANSFAC yes 112493680
chr19 12894784 12894794 SP1 JASPAR yes 70806022
chr19 12894784 12894794 SP1 JASPAR yes 112493681
chr19 12894785 12894792 SP1 TRANSFAC yes 70806023
chr19 12894785 12894792 SP1 TRANSFAC yes 112493682
chr19 12894786 12894791 SP1 TRANSFAC yes 70806024
chr19 12894786 12894791 SP1 TRANSFAC yes 112493683
chr19 12894786 12894792 SP1 TRANSFAC yes 70806025
chr19 12894786 12894792 SP1 TRANSFAC yes 112493684
chr19 12894786 12894793 SP1 TRANSFAC yes 70806026
chr19 12894786 12894793 SP1 TRANSFAC yes 112493685
chr19 12894787 12894797 ZNF740 JASPAR yes 70806027
chr19 12894787 12894797 ZNF740 JASPAR yes 112493686
Genes associated with rs143806325[chr19:12894788], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More