EnhancerDB
  1. Home
  2. SNP
  3. rs143824280[chr17:27486395]
Enhancers that have rs143824280[chr17:27486395]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27463605 27492255 enh4319
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143824280[chr17:27486395]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27486385 27486400 TFAP2A JASPAR yes 53719096
chr17 27486385 27486400 TFAP2C JASPAR yes 53719097
Genes associated with rs143824280[chr17:27486395], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More