EnhancerDB
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  3. rs143851771[chr19:13168341]
Enhancers that have rs143851771[chr19:13168341]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs143851771[chr19:13168341]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13166402 13168435 ZNF274 GTRD no Cervix (HeLa-S3) 107690441
chr19 13166402 13168435 ZNF274 GTRD no Cervix (HeLa-S3) 108388443
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 21850576
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 107690442
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 108388444
chr19 13166474 13168499 ZBTB33 GTRD no Lung (A549) 107690443
chr19 13166474 13168499 ZBTB33 GTRD no Lung (A549) 108388445
chr19 13166647 13168377 ZNF274 GTRD no Cervix (HeLa-S3) 107690444
chr19 13166647 13168377 ZNF274 GTRD no Cervix (HeLa-S3) 108388446
chr19 13166674 13168554 ZNF274 GTRD no Blood (GM12878) 107690446
chr19 13166674 13168554 ZNF274 GTRD no Blood (GM12878) 108388448
chr19 13166687 13168399 ZNF274 GTRD no Blood (GM12878) 107690447
chr19 13166687 13168399 ZNF274 GTRD no Blood (GM12878) 108388449
chr19 13166741 13169326 ZNF274 GTRD no Blood (GM12878) 107690450
chr19 13166741 13169326 ZNF274 GTRD no Blood (GM12878) 108388452
chr19 13166782 13168447 ZBTB33 GTRD no Lung (A549) 107690452
chr19 13166782 13168447 ZBTB33 GTRD no Lung (A549) 108388454
chr19 13166817 13168668 TCF7L2 GTRD no Colon (HCT116) 21850581
chr19 13166817 13168668 TCF7L2 GTRD no Colon (HCT116) 107690458
chr19 13166817 13168668 TCF7L2 GTRD no Colon (HCT116) 108388460
chr19 13166827 13168368 ZNF274 GTRD no Liver (HepG2) 21850582
chr19 13166827 13168368 ZNF274 GTRD no Liver (HepG2) 107690459
chr19 13166827 13168368 ZNF274 GTRD no Liver (HepG2) 108388461
chr19 13166854 13168594 ZBTB33 GTRD no Lung (A549) 107690460
chr19 13166854 13168594 ZBTB33 GTRD no Lung (A549) 108388462
chr19 13166891 13168407 ZBTB33 GTRD no Lung (A549) 107690465
chr19 13166891 13168407 ZBTB33 GTRD no Lung (A549) 108388467
chr19 13166937 13168541 ZNF274 GTRD no Cervix (HeLa-S3) 107690467
chr19 13166937 13168541 ZNF274 GTRD no Cervix (HeLa-S3) 108388469
chr19 13166986 13168346 TCF7L2 GTRD no Colon (HCT116) 21850586
chr19 13166986 13168346 TCF7L2 GTRD no Colon (HCT116) 107690469
chr19 13166986 13168346 TCF7L2 GTRD no Colon (HCT116) 108388471
chr19 13167033 13168380 ZNF274 GTRD no Cervix (HeLa-S3) 107690474
chr19 13167033 13168380 ZNF274 GTRD no Cervix (HeLa-S3) 108388476
chr19 13167072 13168368 ZNF274 GTRD no Blood (GM12878) 107690475
chr19 13167072 13168368 ZNF274 GTRD no Blood (GM12878) 108388477
chr19 13167092 13168370 ZNF274 GTRD no Cervix (HeLa-S3) 107690476
chr19 13167092 13168370 ZNF274 GTRD no Cervix (HeLa-S3) 108388478
chr19 13167132 13168434 ZBTB33 GTRD no Lung (A549) 107690478
chr19 13167132 13168434 ZBTB33 GTRD no Lung (A549) 108388480
chr19 13167140 13168447 ZBTB33 GTRD no Brain (SK-N-SH) 21850591
chr19 13167140 13168447 ZBTB33 GTRD no Brain (SK-N-SH) 107690480
chr19 13167140 13168447 ZBTB33 GTRD no Brain (SK-N-SH) 108388482
chr19 13167236 13168945 ZNF274 GTRD no Blood (GM12878) 107690502
chr19 13167236 13168945 ZNF274 GTRD no Blood (GM12878) 108388504
chr19 13167240 13168429 ZNF274 GTRD no Bone Marrow (K562) 107690505
chr19 13167240 13168429 ZNF274 GTRD no Bone Marrow (K562) 108388507
chr19 13167244 13168398 ZBTB33 GTRD no Lung (A549) 107690509
chr19 13167244 13168398 ZBTB33 GTRD no Lung (A549) 108388511
chr19 13167263 13168401 ZNF274 GTRD no Cervix (HeLa-S3) 107690523
chr19 13167263 13168401 ZNF274 GTRD no Cervix (HeLa-S3) 108388525
chr19 13167266 13168469 ZNF274 GTRD no Blood (GM12878) 107690528
chr19 13167266 13168469 ZNF274 GTRD no Blood (GM12878) 108388530
chr19 13167269 13168344 ZBTB33 GTRD no Brain (SK-N-SH) 21850609
chr19 13167269 13168344 ZBTB33 GTRD no Brain (SK-N-SH) 107690530
chr19 13167269 13168344 ZBTB33 GTRD no Brain (SK-N-SH) 108388532
chr19 13167275 13168383 ZBTB33 GTRD no Lung (A549) 107690535
chr19 13167275 13168383 ZBTB33 GTRD no Lung (A549) 108388537
chr19 13167281 13168346 ZNF274 GTRD no Cervix (HeLa-S3) 107690539
chr19 13167281 13168346 ZNF274 GTRD no Cervix (HeLa-S3) 108388541
chr19 13167284 13168509 ZNF274 GTRD no Cervix (HeLa-S3) 107690540
chr19 13167284 13168509 ZNF274 GTRD no Cervix (HeLa-S3) 108388542
chr19 13167312 13168378 ZNF274 GTRD no Liver (HepG2) 21850622
chr19 13167312 13168378 ZNF274 GTRD no Liver (HepG2) 107690559
chr19 13167312 13168378 ZNF274 GTRD no Liver (HepG2) 108388561
chr19 13167327 13168361 ZNF274 GTRD no Bone Marrow (K562) 107690581
chr19 13167327 13168361 ZNF274 GTRD no Bone Marrow (K562) 108388583
chr19 13167333 13168413 ZNF274 GTRD no Blood (GM12878) 107690593
chr19 13167333 13168413 ZNF274 GTRD no Blood (GM12878) 108388595
chr19 13168327 13168341 GLIS2 JASPAR yes 112506044
chr19 13168341 13168355 EBF1 JASPAR yes 112506045
Genes associated with rs143851771[chr19:13168341], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More