EnhancerDB
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  3. rs143970923[chr16:19708087]
Enhancers that have rs143970923[chr16:19708087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19704325 19714695 enh16595
Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143970923[chr16:19708087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19707362 19708336 TCF7L2 GTRD no Colon (HCT116) 108186494
chr16 19707421 19709163 TCF7L2 GTRD no Colon (HCT116) 108186495
chr16 19707446 19708314 ZNF143 GTRD no Epithelial (MCF-7) 21695597
chr16 19707446 19708314 ZNF143 GTRD no Epithelial (MCF-7) 108186496
chr16 19707451 19708705 ZNF143 GTRD no Epithelial (MCF-7) 21695598
chr16 19707451 19708705 ZNF143 GTRD no Epithelial (MCF-7) 108186497
chr16 19707491 19708437 ZNF274 GTRD no Bone Marrow (K562) 108186498
chr16 19707509 19708240 ZNF274 GTRD no Bone Marrow (K562) 108186499
chr16 19707535 19708143 TCF7L2 GTRD no Colon (HCT116) 108186500
chr16 19707914 19708474 TCF7L2 GTRD no Colon (HCT116) 108186515
chr16 19707980 19708385 ZNF274 GTRD no Bone Marrow (K562) 108186516
chr16 19707983 19708517 ZNF274 GTRD no Bone Marrow (K562) 108186517
chr16 19708076 19708089 POU3F3 JASPAR yes 9877199
chr16 19708081 19708091 ALX3 JASPAR yes 9877200
chr16 19708081 19708091 EN2 JASPAR yes 9877201
chr16 19708081 19708091 ESX1 JASPAR yes 9877202
chr16 19708081 19708091 GBX1 JASPAR yes 9877203
chr16 19708081 19708091 LBX2 JASPAR yes 9877204
chr16 19708081 19708091 LHX2 JASPAR yes 9877205
chr16 19708081 19708091 MIXL1 JASPAR yes 9877206
chr16 19708082 19708090 LHX9 JASPAR yes 9877207
chr16 19708082 19708090 SHOX JASPAR yes 9877208
Genes associated with rs143970923[chr16:19708087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More