EnhancerDB
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  3. rs144270404[chr17:46566588]
Enhancers that have rs144270404[chr17:46566588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs144270404[chr17:46566588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46566577 46566590 SMAD2 JASPAR yes 54589114
chr17 46566580 46566590 TBR1 JASPAR yes 54589115
chr17 46566581 46566591 TBX21 JASPAR yes 54589116
chr17 46566582 46566590 MGA JASPAR yes 54589117
chr17 46566582 46566590 TBX15 JASPAR yes 54589118
chr17 46566582 46566590 TBX1 JASPAR yes 54589119
chr17 46566582 46566590 TBX4 JASPAR yes 54589120
chr17 46566582 46566590 TBX5 JASPAR yes 54589121
chr17 46566582 46566591 ZEB1 JASPAR yes 54589122
chr17 46566582 46566594 PKNOX1 JASPAR yes 54589123
chr17 46566582 46566594 TGIF1 JASPAR yes 54589124
chr17 46566582 46566595 ZBTB18 JASPAR yes 54589125
chr17 46566583 46566593 FIGLA JASPAR yes 54589126
chr17 46566583 46566593 ID4 JASPAR yes 54589127
chr17 46566583 46566593 TCF3 JASPAR yes 54589128
chr17 46566583 46566593 TCF4 JASPAR yes 54589129
chr17 46566584 46566593 SNAI2 JASPAR yes 54589130
chr17 46566585 46566590 USF2 TRANSFAC yes 54589131
Genes associated with rs144270404[chr17:46566588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More