EnhancerDB
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  3. rs144352556[chr1:202009352]
Enhancers that have rs144352556[chr1:202009352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs144352556[chr1:202009352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 21365535
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 107857423
chr1 202007408 202011594 ZNF143 GTRD no Epithelial (MCF-7) 21365579
chr1 202007408 202011594 ZNF143 GTRD no Epithelial (MCF-7) 107857436
chr1 202007719 202009431 ZNF143 GTRD no Epithelial (MCF-7) 21365583
chr1 202007719 202009431 ZNF143 GTRD no Epithelial (MCF-7) 107857447
chr1 202007918 202009550 ZNF143 GTRD no Epithelial (MCF-7) 21365608
chr1 202007918 202009550 ZNF143 GTRD no Epithelial (MCF-7) 107857492
chr1 202008026 202009357 ZNF143 GTRD no Epithelial (MCF-7) 21365624
chr1 202008026 202009357 ZNF143 GTRD no Epithelial (MCF-7) 107857517
chr1 202008848 202011124 ZNF143 GTRD no Epithelial (MCF-7) 21365634
chr1 202008912 202011549 ZNF143 GTRD no Epithelial (MCF-7) 21365635
chr1 202008912 202011625 ZNF274 GTRD no Cervix (HeLa-S3) 21365636
chr1 202008918 202011621 ZNF274 GTRD no Cervix (HeLa-S3) 21365637
chr1 202008928 202010966 ZNF143 GTRD no Epithelial (MCF-7) 21365638
chr1 202008954 202021472 ZBTB33 GTRD no Lung (A549) 107857529
chr1 202009056 202010289 ZNF143 GTRD no Epithelial (MCF-7) 21365639
chr1 202009061 202011515 ZNF143 GTRD no Epithelial (MCF-7) 21365640
chr1 202009074 202011702 ZNF274 GTRD no Liver (HepG2) 21365641
chr1 202009074 202012363 ZNF274 GTRD no Cervix (HeLa-S3) 21365642
chr1 202009111 202020493 ZBTB33 GTRD no Lung (A549) 107857530
chr1 202009119 202010299 ZNF143 GTRD no Epithelial (MCF-7) 21365643
chr1 202009148 202009996 ZNF274 GTRD no Cervix (HeLa-S3) 21365644
chr1 202009150 202010970 ZNF143 GTRD no Epithelial (MCF-7) 21365645
chr1 202009164 202009598 ZNF143 GTRD no Epithelial (MCF-7) 21365646
chr1 202009172 202011681 TCF7L2 GTRD no Colon (HCT116) 21365647
chr1 202009176 202011557 ZNF143 GTRD no Epithelial (MCF-7) 21365648
chr1 202009208 202009911 ZNF274 GTRD no Liver (HepG2) 21365649
chr1 202009214 202010027 ZNF143 GTRD no Epithelial (MCF-7) 21365650
chr1 202009228 202010119 ZNF274 GTRD no Liver (HepG2) 21365651
chr1 202009266 202010038 ZNF274 GTRD no Cervix (HeLa-S3) 21365652
chr1 202009274 202011359 ZNF274 GTRD no Cervix (HeLa-S3) 21365653
chr1 202009286 202009959 TCF7L2 GTRD no Colon (HCT116) 21365654
chr1 202009288 202011059 ZNF274 GTRD no Liver (HepG2) 21365655
chr1 202009289 202011063 ZNF274 GTRD no Liver (HepG2) 21365656
chr1 202009297 202011085 ZNF274 GTRD no Liver (HepG2) 21365657
chr1 202009308 202011077 ZNF274 GTRD no Liver (HepG2) 21365658
chr1 202009310 202011103 ZNF274 GTRD no Liver (HepG2) 21365659
chr1 202009330 202010890 ZNF274 GTRD no Liver (HepG2) 21365660
chr1 202009342 202009363 ZNF263 JASPAR yes 34545116
chr1 202009344 202010028 ZNF143 GTRD no Epithelial (MCF-7) 21365661
chr1 202009345 202009366 ZNF263 JASPAR yes 34545117
chr1 202009345 202010990 ZNF274 GTRD no Liver (HepG2) 21365662
Genes associated with rs144352556[chr1:202009352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More