EnhancerDB
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  3. rs144546540[chr6:42013027]
Enhancers that have rs144546540[chr6:42013027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42004605 42015829 enh9109
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs144546540[chr6:42013027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42013015 42013030 HNF4A JASPAR yes 101689719
chr6 42013016 42013030 NR2F1 JASPAR yes 101689720
chr6 42013016 42013031 HNF4G JASPAR yes 101689721
Genes associated with rs144546540[chr6:42013027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More