EnhancerDB
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  3. rs144746548[chr1:172879785]
Enhancers that have rs144746548[chr1:172879785]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs144746548[chr1:172879785]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172879775 172879785 POU6F2 JASPAR yes 33164942
chr1 172879776 172879786 ALX3 JASPAR yes 33164943
chr1 172879776 172879786 GSX1 JASPAR yes 33164944
chr1 172879776 172879786 MEOX1 JASPAR yes 33164945
chr1 172879777 172879785 LBX1 JASPAR yes 33164946
chr1 172879777 172879785 PDX1 JASPAR yes 33164947
chr1 172879777 172879785 VAX1 JASPAR yes 33164948
chr1 172879777 172879785 VAX2 JASPAR yes 33164949
chr1 172879777 172879785 VSX1 JASPAR yes 33164950
chr1 172879777 172879785 VSX2 JASPAR yes 33164951
Genes associated with rs144746548[chr1:172879785], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More