EnhancerDB
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  3. rs144805704[chr17:53532242]
Enhancers that have rs144805704[chr17:53532242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs144805704[chr17:53532242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53532180 53532724 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772713
chr17 53532201 53532705 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772714
chr17 53532202 53532472 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772715
chr17 53532224 53532514 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772716
chr17 53532226 53532702 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772717
chr17 53532232 53532612 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772718
chr17 53532235 53532247 TAL1 JASPAR yes 54853342
chr17 53532236 53532248 BHLHE23 JASPAR yes 54853343
chr17 53532237 53532247 OLIG1 JASPAR yes 54853344
chr17 53532237 53532247 OLIG2 JASPAR yes 54853345
chr17 53532237 53532247 OLIG3 JASPAR yes 54853346
chr17 53532240 53532251 FOXC1 JASPAR yes 54853347
chr17 53532241 53532245 YY1 TRANSFAC yes 54853348
Genes associated with rs144805704[chr17:53532242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More