EnhancerDB
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  3. rs145012828[chr2:39325054]
Enhancers that have rs145012828[chr2:39325054]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs145012828[chr2:39325054]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39325042 39325060 NR3C1 JASPAR yes 73181611
chr2 39325046 39325061 SOX21 JASPAR yes 73181612
chr2 39325054 39325058 YY1 TRANSFAC yes 73181614
chr2 39325054 39325069 STAT1 JASPAR yes 73181615
Genes associated with rs145012828[chr2:39325054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More