EnhancerDB
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  3. rs145029954[chr16:88305257]
Enhancers that have rs145029954[chr16:88305257]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs145029954[chr16:88305257]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88303566 88305632 TEF1 GTRD no Bone (Osteoblast) 21735730
chr16 88303659 88305296 ZBTB33 GTRD no Brain (SK-N-SH) 21735731
chr16 88303772 88305277 ZBTB33 GTRD no Brain (SK-N-SH) 21735734
chr16 88303778 88305386 ZBTB33 GTRD no Brain (SK-N-SH) 21735735
chr16 88303901 88305323 AR GTRD no Prostate (PC-3) 21735739
chr16 88303925 88305706 ZBTB33 GTRD no Lung (A549) 21735741
chr16 88303931 88305945 ZBTB33 GTRD no Lung (A549) 21735742
chr16 88304028 88305920 ZBTB33 GTRD no Lung (A549) 21735754
chr16 88304075 88305292 ZBTB33 GTRD no Brain (SK-N-SH) 21735758
chr16 88304358 88306207 ZBTB33 GTRD no Lung (A549) 21735772
chr16 88304890 88306784 ZNF143 GTRD no Epithelial (MCF-7) 21735774
chr16 88305057 88306317 ZBTB33 GTRD no Lung (A549) 21735775
chr16 88305141 88306069 YY1 GTRD no Embryonic Stem Cell Line (H1-hESC) 21735776
chr16 88305186 88305692 TCF7L2 GTRD no Colon (HCT116) 21735777
chr16 88305247 88305258 FOXH1 JASPAR yes 12272688
chr16 88305251 88306043 ZNF274 GTRD no Cervix (HeLa-S3) 21735778
chr16 88305255 88305261 SOX10 JASPAR yes 12272689
Genes associated with rs145029954[chr16:88305257], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More