EnhancerDB
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  3. rs145048169[chr17:70410721]
Enhancers that have rs145048169[chr17:70410721]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs145048169[chr17:70410721]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70410715 70410730 HNF1A JASPAR yes 55785231
chr17 70410715 70410736 IRF1 JASPAR yes 55785232
chr17 70410716 70410737 IRF1 JASPAR yes 55785233
chr17 70410718 70410739 IRF1 JASPAR yes 55785234
chr17 70410719 70410740 IRF1 JASPAR yes 55785235
chr17 70410720 70410735 FOXP1 JASPAR yes 55785236
chr17 70410720 70410741 IRF1 JASPAR yes 55785237
chr17 70410721 70410736 FOXP1 JASPAR yes 55785238
chr17 70410721 70410742 IRF1 JASPAR yes 55785239
Genes associated with rs145048169[chr17:70410721], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More