EnhancerDB
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  3. rs145076534[chr6:41686139]
Enhancers that have rs145076534[chr6:41686139]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 41686086 41686432 vista51931
VISTA
Transcript factors that have rs145076534[chr6:41686139]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41686133 41686148 SCRT1 JASPAR yes 70363239
chr6 41686133 41686148 SCRT1 JASPAR yes 101668827
chr6 41686135 41686147 GRHL1 JASPAR yes 70363240
chr6 41686135 41686147 GRHL1 JASPAR yes 101668828
chr6 41686136 41686139 MYB TRANSFAC yes 70363241
chr6 41686136 41686139 MYB TRANSFAC yes 101668829
chr6 41686136 41686148 TGIF1 JASPAR yes 70363242
chr6 41686136 41686148 TGIF2 JASPAR yes 70363243
chr6 41686136 41686148 TGIF1 JASPAR yes 101668830
chr6 41686136 41686148 TGIF2 JASPAR yes 101668831
chr6 41686137 41686155 TP53 JASPAR yes 70363244
chr6 41686137 41686155 TP73 JASPAR yes 70363245
chr6 41686137 41686155 TP53 JASPAR yes 101668832
chr6 41686137 41686155 TP73 JASPAR yes 101668833
Genes associated with rs145076534[chr6:41686139], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More