EnhancerDB
  1. Home
  2. SNP
  3. rs145090388[chr12:53616622]
Enhancers that have rs145090388[chr12:53616622]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53611525 53620934 enh14740
Skin (Keratinocyte) Prostate (PC-3) Blood (T-cell) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Uterus Thymus Heart
Transcript factors that have rs145090388[chr12:53616622]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53615784 53616638 ZNF274 GTRD no Blood (GM12878) 108035699
chr12 53616619 53616628 VENTX JASPAR yes 120977687
chr12 53616619 53616629 GBX2 JASPAR yes 120977688
chr12 53616619 53616629 HOXB3 JASPAR yes 120977689
chr12 53616619 53616629 MNX1 JASPAR yes 120977690
chr12 53616620 53616628 BARX1 JASPAR yes 120977691
chr12 53616620 53616628 EN1 JASPAR yes 120977692
chr12 53616620 53616628 ISL2 JASPAR yes 120977693
chr12 53616620 53616628 MSX1 JASPAR yes 120977694
chr12 53616620 53616628 MSX2 JASPAR yes 120977695
chr12 53616620 53616628 PDX1 JASPAR yes 120977696
Genes associated with rs145090388[chr12:53616622], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More