EnhancerDB
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  3. rs145188671[chr1:25017266]
Enhancers that have rs145188671[chr1:25017266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs145188671[chr1:25017266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017256 25025212 ZNF274 GTRD no Blood (GM12878) 107802463
chr1 25017259 25017268 ZEB1 JASPAR yes 27518742
chr1 25017259 25017274 SCRT1 JASPAR yes 27518743
chr1 25017260 25017270 ID4 JASPAR yes 27518744
chr1 25017260 25017270 TCF3 JASPAR yes 27518745
chr1 25017260 25017270 TCF4 JASPAR yes 27518746
chr1 25017261 25017270 SNAI2 JASPAR yes 27518747
chr1 25017262 25017267 USF2 TRANSFAC yes 27518748
Genes associated with rs145188671[chr1:25017266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More