EnhancerDB
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  3. rs145349983[chr19:13180924]
Enhancers that have rs145349983[chr19:13180924]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs145349983[chr19:13180924]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13180005 13182585 ZNF274 GTRD no Blood (GM12878) 108388648
chr19 13180005 13182585 ZNF274 GTRD no Blood (GM12878) 108388649
chr19 13180065 13181138 ZNF274 GTRD no Blood (GM12878) 108388651
chr19 13180292 13180999 GATA1 UCSC Txn Factor no Conserved 108388654
chr19 13180332 13181094 POLR2A UCSC Txn Factor no Conserved 108388656
chr19 13180435 13181088 GATA2 UCSC Txn Factor no Conserved 108388664
chr19 13180508 13181032 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108388693
chr19 13180524 13180980 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108388696
chr19 13180538 13181088 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108388701
chr19 13180741 13181167 ZNF274 GTRD no Bone Marrow (K562) 108388707
chr19 13180779 13181062 ZNF274 GTRD no Blood (GM12878) 108388708
chr19 13180798 13181403 TCF7L2 GTRD no Colon (HCT116) 21850663
chr19 13180798 13181403 TCF7L2 GTRD no Colon (HCT116) 108388709
chr19 13180798 13181403 TCF7L2 GTRD no Colon (HCT116) 108388710
chr19 13180819 13181566 TCF7L2 GTRD no Colon (HCT116) 21850664
chr19 13180819 13181566 TCF7L2 GTRD no Colon (HCT116) 108388711
chr19 13180867 13181407 TCF7L2 GTRD no Colon (HCT116) 21850665
chr19 13180867 13181407 TCF7L2 GTRD no Colon (HCT116) 108388712
chr19 13180918 13180930 PROX1 JASPAR yes 112507814
Genes associated with rs145349983[chr19:13180924], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More