EnhancerDB
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  3. rs145393179[chr12:53615554]
Enhancers that have rs145393179[chr12:53615554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53611525 53620934 enh14740
Skin (Keratinocyte) Prostate (PC-3) Blood (T-cell) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Uterus Thymus Heart
chr12 53615195 53615822 vista13518
VISTA
Transcript factors that have rs145393179[chr12:53615554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53613873 53615835 POLR2A UCSC Txn Factor no Conserved 108035615
chr12 53614899 53615605 PHF8 UCSC Txn Factor no Conserved 108035627
chr12 53614899 53615605 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035628
chr12 53614976 53615745 CTCF UCSC Txn Factor no Conserved 108035632
chr12 53614984 53615644 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108035633
chr12 53615011 53615587 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035635
chr12 53615050 53615600 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108035637
chr12 53615071 53615595 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108035641
chr12 53615074 53615684 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21548997
chr12 53615074 53615684 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108035642
chr12 53615083 53615623 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035643
chr12 53615118 53615594 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108035646
chr12 53615127 53615557 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108035647
chr12 53615141 53615605 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108035648
chr12 53615149 53615559 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108035649
chr12 53615165 53615601 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108035650
chr12 53615179 53615615 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035651
chr12 53615209 53615569 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108035654
chr12 53615280 53615716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108035659
chr12 53615283 53615563 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035660
chr12 53615283 53615796 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035661
chr12 53615291 53615621 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108035663
chr12 53615300 53615690 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108035664
chr12 53615308 53615684 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108035665
chr12 53615320 53615595 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035667
chr12 53615324 53615600 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21549000
chr12 53615324 53615600 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108035670
chr12 53615327 53615823 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035671
chr12 53615343 53615807 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108035672
chr12 53615348 53615718 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035674
chr12 53615356 53615746 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035675
chr12 53615363 53615819 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035676
chr12 53615366 53615856 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21549001
chr12 53615366 53615856 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108035678
chr12 53615369 53615613 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21549002
chr12 53615369 53615613 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108035679
chr12 53615370 53615806 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035680
chr12 53615375 53615619 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035681
chr12 53615379 53615689 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035682
chr12 53615380 53615610 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035683
chr12 53615380 53615780 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035684
chr12 53615395 53615659 ZNF274 GTRD no Liver (HepG2) 108035685
chr12 53615413 53615769 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21549003
chr12 53615413 53615769 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108035686
chr12 53615418 53615858 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035687
chr12 53615422 53615752 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035688
chr12 53615426 53615564 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035689
chr12 53615440 53615700 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035690
chr12 53615444 53615814 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108035691
chr12 53615463 53615732 ZNF274 GTRD no Cervix (HeLa-S3) 108035692
chr12 53615506 53615722 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035693
chr12 53615522 53615692 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035694
chr12 53615535 53615726 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108035695
Genes associated with rs145393179[chr12:53615554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 54104903 54121529 - CALCOCO1 ENSG00000012822.11 54121529 489349 Liver 0.328556 12132