EnhancerDB
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  3. rs145535238[chr18:56473058]
Enhancers that have rs145535238[chr18:56473058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56470801 56474951 enh69484
Neural Stem Cells (H9)
chr18 56471647 56474866 vista767
VISTA
Transcript factors that have rs145535238[chr18:56473058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56472570 56473100 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107689980
chr18 56472588 56473104 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107689981
chr18 56472818 56473414 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107689982
chr18 56472955 56473964 ZNF274 GTRD no Bone Marrow (K562) 107689983
chr18 56473050 56473060 OLIG2 JASPAR yes 110979394
chr18 56473050 56473060 OLIG3 JASPAR yes 110979395
chr18 56473050 56473060 OLIG2 JASPAR yes 118598806
chr18 56473050 56473060 OLIG3 JASPAR yes 118598807
chr18 56473057 56473067 HOXA13 JASPAR yes 110979396
chr18 56473057 56473067 HOXB13 JASPAR yes 110979397
chr18 56473057 56473067 HOXD13 JASPAR yes 110979398
chr18 56473057 56473067 HOXA13 JASPAR yes 118598808
chr18 56473057 56473067 HOXB13 JASPAR yes 118598809
chr18 56473057 56473067 HOXD13 JASPAR yes 118598810
chr18 56473057 56473068 HOXA10 JASPAR yes 110979399
chr18 56473057 56473068 HOXA10 JASPAR yes 118598811
chr18 56473058 56473067 CDX1 JASPAR yes 110979400
chr18 56473058 56473067 CDX1 JASPAR yes 118598812
Genes associated with rs145535238[chr18:56473058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More