EnhancerDB
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  3. rs145678394[chr19:13172503]
Enhancers that have rs145678394[chr19:13172503]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs145678394[chr19:13172503]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13171142 13173283 TCF7L2 GTRD no Colon (HCT116) 21850641
chr19 13171142 13173283 TCF7L2 GTRD no Colon (HCT116) 108388625
chr19 13171247 13173648 TCF7L2 GTRD no Colon (HCT116) 21850644
chr19 13171247 13173648 TCF7L2 GTRD no Colon (HCT116) 108388629
chr19 13172493 13172503 TEAD1 JASPAR yes 112506685
chr19 13172493 13172503 TEAD4 JASPAR yes 112506686
chr19 13172500 13172506 NFIC JASPAR yes 112506687
chr19 13172501 13172513 PKNOX1 JASPAR yes 112506688
chr19 13172501 13172513 PKNOX2 JASPAR yes 112506689
chr19 13172501 13172513 TGIF1 JASPAR yes 112506690
chr19 13172501 13172513 TGIF2 JASPAR yes 112506691
chr19 13172502 13172512 MSC JASPAR yes 112506692
chr19 13172502 13172512 MYF6 JASPAR yes 112506693
Genes associated with rs145678394[chr19:13172503], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More