EnhancerDB
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  3. rs145892227[chr16:372397]
Enhancers that have rs145892227[chr16:372397]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs145892227[chr16:372397]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 21683784
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170123
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170124
chr16 372386 372400 MTF1 JASPAR yes 9104224
chr16 372394 372404 ID4 JASPAR yes 9104225
chr16 372394 372404 TCF3 JASPAR yes 9104226
chr16 372394 372404 TCF4 JASPAR yes 9104227
chr16 372395 372404 SNAI2 JASPAR yes 9104228
chr16 372396 372401 USF2 TRANSFAC yes 9104229
Genes associated with rs145892227[chr16:372397], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More