EnhancerDB
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  3. rs145924555[chr1:172874480]
Enhancers that have rs145924555[chr1:172874480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs145924555[chr1:172874480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172874470 172874488 RARA JASPAR yes 33163994
chr1 172874476 172874492 SOX8 JASPAR yes 33163996
chr1 172874477 172874490 NR2F1 JASPAR yes 33163997
chr1 172874478 172874497 CTCF JASPAR yes 33163998
Genes associated with rs145924555[chr1:172874480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More