EnhancerDB
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  3. rs146149539[chr1:40301029]
Enhancers that have rs146149539[chr1:40301029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs146149539[chr1:40301029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40301023 40301038 FOXA1 JASPAR yes 28295296
chr1 40301025 40301036 FOXP2 JASPAR yes 28295297
chr1 40301026 40301034 FOXD1 JASPAR yes 28295298
chr1 40301026 40301034 FOXO3 JASPAR yes 28295299
chr1 40301027 40301034 FOXD2 JASPAR yes 28295300
chr1 40301027 40301034 FOXI1 JASPAR yes 28295301
chr1 40301027 40301034 FOXL1 JASPAR yes 28295302
chr1 40301027 40301034 FOXO4 JASPAR yes 28295303
chr1 40301027 40301034 FOXO6 JASPAR yes 28295304
chr1 40301027 40301034 FOXP3 JASPAR yes 28295305
chr1 40301027 40301035 FOXO3 JASPAR yes 28295306
chr1 40301027 40301038 FOXA1 JASPAR yes 28295307
Genes associated with rs146149539[chr1:40301029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More