EnhancerDB
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  3. rs146204539[chr11:128335983]
Enhancers that have rs146204539[chr11:128335983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 128331335 128350069 enh2103
Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs146204539[chr11:128335983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 128335680 128336060 SOX2 GTRD no Neural Stem Cells (H9) 108006784
chr11 128335759 128336019 SOX2 GTRD no Neural Stem Cells (H9) 108006785
chr11 128335976 128335992 SOX4 JASPAR yes 42307696
chr11 128335979 128335984 MYC TRANSFAC yes 42307697
Genes associated with rs146204539[chr11:128335983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More