EnhancerDB
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  3. rs1462173[chr15:70052447]
Enhancers that have rs1462173[chr15:70052447]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 70045752 70060475 enh16279
Skin (Keratinocyte) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Stomach
chr15 70052375 70052953 vista20523
VISTA
Transcript factors that have rs1462173[chr15:70052447]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 70052169 70052652 ZNF143 GTRD no Epithelial (MCF-7) 108152017
chr15 70052184 70052652 TCF7L2 GTRD no Colon (HCT116) 21664805
chr15 70052184 70052652 TCF7L2 GTRD no Colon (HCT116) 108152018
chr15 70052236 70052696 TCF7L2 GTRD no Colon (HCT116) 21664806
chr15 70052236 70052696 TCF7L2 GTRD no Colon (HCT116) 108152019
chr15 70052289 70052738 ZNF143 GTRD no Epithelial (MCF-7) 108152020
chr15 70052428 70052449 IRF1 JASPAR yes 24376576
chr15 70052428 70052449 IRF1 JASPAR yes 70551100
chr15 70052432 70052447 PRDM1 JASPAR yes 24376579
chr15 70052432 70052447 STAT2 JASPAR yes 24376580
chr15 70052432 70052447 PRDM1 JASPAR yes 70551103
chr15 70052432 70052447 STAT2 JASPAR yes 70551104
Genes associated with rs1462173[chr15:70052447], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More