EnhancerDB
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  3. rs146217431[chr17:39818212]
Enhancers that have rs146217431[chr17:39818212]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs146217431[chr17:39818212]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 21758082
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 108259243
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 21758083
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 108259244
chr17 39818198 39818212 IRF7 JASPAR yes 54269821
chr17 39818199 39818213 ONECUT2 JASPAR yes 54269822
chr17 39818199 39818213 ONECUT3 JASPAR yes 54269823
chr17 39818200 39818212 IRF1 JASPAR yes 54269824
chr17 39818200 39818216 SOX8 JASPAR yes 54269825
Genes associated with rs146217431[chr17:39818212], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More