EnhancerDB
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  3. rs146315293[chr18:57623100]
Enhancers that have rs146315293[chr18:57623100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57615485 57630775 enh4882
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs146315293[chr18:57623100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57621132 57623330 TCF7L2 GTRD no Colon (HCT116) 21825465
chr18 57621132 57623330 TCF7L2 GTRD no Colon (HCT116) 108339123
chr18 57623089 57623100 CDX2 JASPAR yes 111068083
chr18 57623089 57623103 FOXF2 JASPAR yes 111068084
chr18 57623091 57623103 FOXC2 JASPAR yes 111068085
chr18 57623091 57623105 POU1F1 JASPAR yes 111068086
chr18 57623092 57623104 FOXI1 JASPAR yes 111068087
chr18 57623092 57623104 POU3F1 JASPAR yes 111068088
chr18 57623092 57623105 POU3F3 JASPAR yes 111068089
chr18 57623094 57623102 FOXG1 JASPAR yes 111068090
chr18 57623099 57623103 YY1 TRANSFAC yes 111068091
Genes associated with rs146315293[chr18:57623100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More