EnhancerDB
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  3. rs146404085[chr1:28496628]
Enhancers that have rs146404085[chr1:28496628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28493545 28502817 enh184
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Epithelial (MCF-7)
chr1 28496557 28496804 vista993
VISTA
Transcript factors that have rs146404085[chr1:28496628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28496553 28496817 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802653
chr1 28496623 28496639 RFX2 JASPAR yes 27749339
chr1 28496623 28496639 RFX3 JASPAR yes 27749340
chr1 28496623 28496639 RFX5 JASPAR yes 27749341
chr1 28496623 28496639 RFX2 JASPAR yes 118262389
chr1 28496623 28496639 RFX3 JASPAR yes 118262390
chr1 28496623 28496639 RFX5 JASPAR yes 118262391
chr1 28496624 28496635 STAT1 JASPAR yes 27749342
chr1 28496624 28496635 STAT1 JASPAR yes 118262392
Genes associated with rs146404085[chr1:28496628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More