EnhancerDB
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  3. rs146456486[chr12:53372092]
Enhancers that have rs146456486[chr12:53372092]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146456486[chr12:53372092]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53368995 53373584 TCF7L2 GTRD no Colon (HCT116) 21548544
chr12 53368995 53373584 TCF7L2 GTRD no Colon (HCT116) 108035373
chr12 53368995 53373584 TCF7L2 GTRD no Colon (HCT116) 108035374
chr12 53370030 53373140 ZBTB33 GTRD no Lung (A549) 21548561
chr12 53370030 53373140 ZBTB33 GTRD no Lung (A549) 108035391
chr12 53370036 53372779 ZNF274 GTRD no Blood (GM12878) 108035395
chr12 53370051 53373096 ZBTB33 GTRD no Lung (A549) 21548568
chr12 53370051 53373096 ZBTB33 GTRD no Lung (A549) 108035401
chr12 53370082 53373262 TCF7L2 GTRD no Colon (HCT116) 21548577
chr12 53370082 53373262 TCF7L2 GTRD no Colon (HCT116) 108035411
chr12 53370116 53373240 ZNF274 GTRD no Cervix (HeLa-S3) 21548588
chr12 53370116 53373240 ZNF274 GTRD no Cervix (HeLa-S3) 108035423
chr12 53370122 53373031 ZBTB33 GTRD no Lung (A549) 21548589
chr12 53370122 53373031 ZBTB33 GTRD no Lung (A549) 108035424
chr12 53370125 53373221 ZNF274 GTRD no Cervix (HeLa-S3) 21548591
chr12 53370125 53373221 ZNF274 GTRD no Cervix (HeLa-S3) 108035426
chr12 53370128 53373145 ZNF274 GTRD no Blood (GM12878) 108035427
chr12 53370130 53373031 ZNF274 GTRD no Cervix (HeLa-S3) 21548592
chr12 53370130 53373031 ZNF274 GTRD no Cervix (HeLa-S3) 108035428
chr12 53370141 53373245 ZBTB33 GTRD no Lung (A549) 21548594
chr12 53370141 53373245 ZBTB33 GTRD no Lung (A549) 108035431
chr12 53370149 53373553 ZNF143 GTRD no Epithelial (MCF-7) 21548595
chr12 53370149 53373553 ZNF143 GTRD no Epithelial (MCF-7) 108035433
chr12 53370160 53373022 ZNF143 GTRD no Epithelial (MCF-7) 21548599
chr12 53370160 53373022 ZNF143 GTRD no Epithelial (MCF-7) 108035437
chr12 53370162 53372643 ZNF274 GTRD no Bone Marrow (K562) 21548601
chr12 53370162 53372643 ZNF274 GTRD no Bone Marrow (K562) 108035440
chr12 53370168 53372281 ZNF143 GTRD no Epithelial (MCF-7) 21548603
chr12 53370168 53372281 ZNF143 GTRD no Epithelial (MCF-7) 108035444
chr12 53370169 53373153 ZNF274 GTRD no Cervix (HeLa-S3) 21548604
chr12 53370169 53373153 ZNF274 GTRD no Cervix (HeLa-S3) 108035445
chr12 53370170 53372460 ZNF274 GTRD no Blood (GM12878) 108035446
chr12 53370173 53373032 ZBTB33 GTRD no Lung (A549) 21548606
chr12 53370173 53373032 ZBTB33 GTRD no Lung (A549) 108035448
chr12 53370178 53373035 ZNF274 GTRD no Liver (HepG2) 21548607
chr12 53370178 53373035 ZNF274 GTRD no Liver (HepG2) 108035449
chr12 53370183 53373050 ZNF274 GTRD no Bone Marrow (K562) 21548610
chr12 53370183 53373050 ZNF274 GTRD no Bone Marrow (K562) 108035453
chr12 53370189 53372628 ZNF143 GTRD no Epithelial (MCF-7) 21548611
chr12 53370189 53372628 ZNF143 GTRD no Epithelial (MCF-7) 108035455
chr12 53370190 53372493 ZNF143 GTRD no Epithelial (MCF-7) 21548612
chr12 53370190 53372493 ZNF143 GTRD no Epithelial (MCF-7) 108035456
chr12 53370199 53372974 ZBTB33 GTRD no Lung (A549) 21548614
chr12 53370199 53372974 ZBTB33 GTRD no Lung (A549) 108035458
chr12 53370203 53372304 ZNF143 GTRD no Epithelial (MCF-7) 21548615
chr12 53370203 53372304 ZNF143 GTRD no Epithelial (MCF-7) 108035459
chr12 53370208 53373052 ZBTB33 GTRD no Lung (A549) 21548618
chr12 53370208 53373052 ZBTB33 GTRD no Lung (A549) 108035462
chr12 53370216 53372130 ZNF274 GTRD no Liver (HepG2) 21548621
chr12 53370216 53372130 ZNF274 GTRD no Liver (HepG2) 108035465
chr12 53370219 53372361 ZNF143 GTRD no Epithelial (MCF-7) 21548622
chr12 53370219 53372361 ZNF143 GTRD no Epithelial (MCF-7) 108035466
chr12 53370223 53373071 ZBTB33 GTRD no Lung (A549) 21548625
chr12 53370223 53373071 ZBTB33 GTRD no Lung (A549) 108035469
chr12 53370231 53372201 ZNF143 GTRD no Epithelial (MCF-7) 21548627
chr12 53370231 53372201 ZNF143 GTRD no Epithelial (MCF-7) 108035471
chr12 53370239 53372220 ZNF143 GTRD no Epithelial (MCF-7) 21548629
chr12 53370239 53372220 ZNF143 GTRD no Epithelial (MCF-7) 108035474
chr12 53370239 53372997 ZBTB33 GTRD no Lung (A549) 21548630
chr12 53370239 53372997 ZBTB33 GTRD no Lung (A549) 108035475
chr12 53370240 53372190 ZNF274 GTRD no Liver (HepG2) 21548632
chr12 53370240 53372190 ZNF274 GTRD no Liver (HepG2) 108035477
chr12 53370241 53373020 ZNF274 GTRD no Bone Marrow (K562) 21548633
chr12 53370241 53373020 ZNF274 GTRD no Bone Marrow (K562) 108035478
chr12 53370246 53373183 ZNF274 GTRD no Cervix (HeLa-S3) 21548636
chr12 53370246 53373183 ZNF274 GTRD no Cervix (HeLa-S3) 108035481
chr12 53370248 53373038 ZNF274 GTRD no Bone Marrow (K562) 21548638
chr12 53370248 53373038 ZNF274 GTRD no Bone Marrow (K562) 108035484
chr12 53370250 53372670 ZNF143 GTRD no Epithelial (MCF-7) 21548641
chr12 53370250 53372670 ZNF143 GTRD no Epithelial (MCF-7) 108035487
chr12 53370250 53372900 ZBTB33 GTRD no Lung (A549) 21548642
chr12 53370250 53372900 ZBTB33 GTRD no Lung (A549) 108035488
chr12 53370259 53372220 ZNF274 GTRD no Liver (HepG2) 21548645
chr12 53370259 53372220 ZNF274 GTRD no Liver (HepG2) 108035491
chr12 53370267 53372984 ZNF274 GTRD no Blood (GM12878) 108035496
chr12 53370289 53373146 ZBTB33 GTRD no Lung (A549) 21548655
chr12 53370296 53373045 ZNF143 GTRD no Epithelial (MCF-7) 21548657
chr12 53370314 53373093 ZBTB33 GTRD no Lung (A549) 21548660
chr12 53370344 53373056 ZNF143 GTRD no Epithelial (MCF-7) 21548662
chr12 53370399 53372882 ZBTB33 GTRD no Lung (A549) 21548669
chr12 53370533 53373231 ZNF274 GTRD no Cervix (HeLa-S3) 21548691
chr12 53370534 53372213 ZNF274 GTRD no Liver (HepG2) 21548692
chr12 53370542 53372696 ZNF274 GTRD no Cervix (HeLa-S3) 21548693
chr12 53370542 53373035 ZNF274 GTRD no Cervix (HeLa-S3) 21548694
chr12 53370707 53372130 TCF7L2 GTRD no Colon (HCT116) 21548714
chr12 53370721 53372287 ZNF143 GTRD no Epithelial (MCF-7) 21548719
chr12 53370760 53372305 ZNF274 GTRD no Bone Marrow (K562) 21548733
chr12 53370810 53372098 ZNF274 GTRD no Bone Marrow (K562) 21548748
chr12 53370843 53372274 TCF7L2 GTRD no Colon (HCT116) 21548754
chr12 53370864 53372128 TCF7L2 GTRD no Colon (HCT116) 21548762
chr12 53370879 53372341 ZNF143 GTRD no Epithelial (MCF-7) 21548766
chr12 53370899 53372318 ZNF143 GTRD no Epithelial (MCF-7) 21548773
chr12 53370965 53372220 ZNF274 GTRD no Bone Marrow (K562) 21548782
chr12 53371436 53372487 ZNF274 GTRD no Bone Marrow (K562) 21548810
chr12 53371686 53372884 ZBTB33 GTRD no Lung (A549) 21548812
chr12 53371827 53373032 ZNF274 GTRD no Bone Marrow (K562) 21548814
chr12 53371871 53373312 ZNF274 GTRD no Cervix (HeLa-S3) 21548815
chr12 53371935 53372636 ZNF274 GTRD no Bone Marrow (K562) 21548816
chr12 53371943 53373044 ZNF274 GTRD no Cervix (HeLa-S3) 21548817
chr12 53372078 53372093 MEF2A JASPAR yes 120969418
chr12 53372079 53372094 MEF2C JASPAR yes 120969419
chr12 53372080 53373126 ZNF143 GTRD no Epithelial (MCF-7) 21548818
chr12 53372084 53372750 ZNF274 GTRD no Cervix (HeLa-S3) 21548819
chr12 53372086 53372101 MEF2A JASPAR yes 120969420
chr12 53372087 53372102 MEF2C JASPAR yes 120969421
chr12 53372088 53372100 MEF2A JASPAR yes 120969422
chr12 53372088 53372100 MEF2B JASPAR yes 120969423
chr12 53372088 53372100 MEF2D JASPAR yes 120969424
chr12 53372090 53372094 YY1 TRANSFAC yes 120969425
Genes associated with rs146456486[chr12:53372092], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 52840435 52845910 - KRT6B ENSG00000185479.5 52845910 526182 Ovary 0.459632 12088