EnhancerDB
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  3. rs146472955[chr1:172886712]
Enhancers that have rs146472955[chr1:172886712]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs146472955[chr1:172886712]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172885797 172886774 TCF7L2 GTRD no Colon (HCT116) 21350449
chr1 172886707 172886722 LEF1 JASPAR yes 33166071
chr1 172886709 172886714 ETS2 TRANSFAC yes 33166072
chr1 172886710 172886724 SPI1 JASPAR yes 33166073
chr1 172886710 172886724 SPIC JASPAR yes 33166074
Genes associated with rs146472955[chr1:172886712], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More