EnhancerDB
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  3. rs146553624[chr17:80236870]
Enhancers that have rs146553624[chr17:80236870]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs146553624[chr17:80236870]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80236037 80237798 TCF7L2 GTRD no Colon (HCT116) 21798502
chr17 80236104 80237724 TCF7L2 GTRD no Colon (HCT116) 21798504
chr17 80236142 80237713 TCF7L2 GTRD no Colon (HCT116) 21798505
chr17 80236326 80237672 ZNF143 GTRD no Epithelial (MCF-7) 21798506
chr17 80236381 80237714 TCF7L2 GTRD no Colon (HCT116) 21798507
chr17 80236577 80237177 ZNF143 GTRD no Epithelial (MCF-7) 21798508
chr17 80236581 80236917 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798509
chr17 80236595 80237644 TCF7L2 GTRD no Colon (HCT116) 21798510
chr17 80236614 80237244 ZNF143 GTRD no Epithelial (MCF-7) 21798511
chr17 80236793 80237674 TCF7L2 GTRD no Colon (HCT116) 21798513
chr17 80236797 80237722 ZNF274 GTRD no Bone Marrow (K562) 21798514
chr17 80236806 80237022 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798515
chr17 80236864 80236873 HIC2 JASPAR yes 56356663
chr17 80236865 80237585 TCF7L2 GTRD no Colon (HCT116) 21798516
chr17 80236867 80236875 SP1 TRANSFAC yes 56356664
chr17 80236867 80236877 SP1 JASPAR yes 56356665
Genes associated with rs146553624[chr17:80236870], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More