EnhancerDB
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  3. rs146578301[chr1:221997324]
Enhancers that have rs146578301[chr1:221997324]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs146578301[chr1:221997324]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 221996869 221997430 ZNF274 GTRD no Bone Marrow (K562) 107872194
chr1 221996885 221997439 ZNF274 GTRD no Cervix (HeLa-S3) 21382795
chr1 221996885 221997439 ZNF274 GTRD no Cervix (HeLa-S3) 107872195
chr1 221996948 221997348 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21382797
chr1 221996969 221997441 ZNF274 GTRD no Bone Marrow (K562) 107872196
chr1 221997314 221997324 HMBOX1 JASPAR yes 35571619
chr1 221997320 221997335 RUNX2 JASPAR yes 35571620
chr1 221997323 221997335 GLI2 JASPAR yes 35571621
chr1 221997324 221997334 RUNX3 JASPAR yes 35571622
Genes associated with rs146578301[chr1:221997324], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More