EnhancerDB
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  3. rs146606756[chr17:54857285]
Enhancers that have rs146606756[chr17:54857285]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54855245 54867175 enh32239
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Colon (HCT116) Breast Peripheral Blood (MM.1S) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
chr17 54857276 54857441 vista25206
VISTA
Transcript factors that have rs146606756[chr17:54857285]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54856871 54857683 ZNF143 GTRD no Epithelial (MCF-7) 21772995
chr17 54856871 54857683 ZNF143 GTRD no Epithelial (MCF-7) 108273180
chr17 54856871 54857683 ZNF143 GTRD no Epithelial (MCF-7) 108273181
chr17 54856918 54857388 ZNF143 GTRD no Epithelial (MCF-7) 21772996
chr17 54856918 54857388 ZNF143 GTRD no Epithelial (MCF-7) 108273182
chr17 54856989 54857531 ZNF143 GTRD no Epithelial (MCF-7) 21772997
chr17 54856989 54857531 ZNF143 GTRD no Epithelial (MCF-7) 108273183
chr17 54856989 54857531 ZNF143 GTRD no Epithelial (MCF-7) 108273184
chr17 54857276 54857290 EBF1 JASPAR yes 21258184
chr17 54857276 54857290 EBF1 JASPAR yes 54912129
Genes associated with rs146606756[chr17:54857285], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More