EnhancerDB
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  3. rs146672917[chr12:58806921]
Enhancers that have rs146672917[chr12:58806921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58804159 58816575 enh29596
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Lung (A549) Stomach Pancreas (Panc1) Lung (PC-9) Breast Spleen Epithelial (MCF-7)
Transcript factors that have rs146672917[chr12:58806921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58806566 58807450 ZNF143 GTRD no Epithelial (MCF-7) 21551983
chr12 58806571 58807428 ZNF143 GTRD no Epithelial (MCF-7) 21551984
chr12 58806647 58807345 ZNF143 GTRD no Epithelial (MCF-7) 21551985
chr12 58806795 58807280 ZNF143 GTRD no Epithelial (MCF-7) 21551986
chr12 58806812 58807255 ZNF143 GTRD no Epithelial (MCF-7) 21551987
chr12 58806819 58807213 ZNF143 GTRD no Epithelial (MCF-7) 21551988
chr12 58806831 58807146 ZNF143 GTRD no Epithelial (MCF-7) 21551989
chr12 58806831 58807252 ZNF143 GTRD no Epithelial (MCF-7) 21551990
chr12 58806920 58806930 GSC2 JASPAR yes 121171760
chr12 58806920 58806930 GSC JASPAR yes 121171761
chr12 58806921 58806929 OTX1 JASPAR yes 121171762
chr12 58806921 58806929 OTX2 JASPAR yes 121171763
chr12 58806921 58806930 PITX3 JASPAR yes 121171764
Genes associated with rs146672917[chr12:58806921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More