EnhancerDB
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  3. rs146851728[chr12:46553960]
Enhancers that have rs146851728[chr12:46553960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs146851728[chr12:46553960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46552769 46554541 TCF7L2 GTRD no Colon (HCT116) 21540723
chr12 46552835 46554033 ZNF274 GTRD no Cervix (HeLa-S3) 21540724
chr12 46552870 46554001 TCF7L2 GTRD no Colon (HCT116) 21540725
chr12 46552876 46554399 ZNF274 GTRD no Cervix (HeLa-S3) 21540726
chr12 46552916 46554028 TCF7L2 GTRD no Colon (HCT116) 21540728
chr12 46552926 46554356 TCF7L2 GTRD no Colon (HCT116) 21540729
chr12 46553114 46553980 ZNF274 GTRD no Cervix (HeLa-S3) 21540737
chr12 46553127 46554380 ZNF274 GTRD no Cervix (HeLa-S3) 21540738
chr12 46553150 46554196 ZNF274 GTRD no Cervix (HeLa-S3) 21540739
chr12 46553158 46554121 TCF7L2 GTRD no Colon (HCT116) 21540741
chr12 46553158 46554597 ZBTB33 GTRD no Brain (SK-N-SH) 21540742
chr12 46553200 46558410 ZBTB33 GTRD no Brain (SK-N-SH) 21540745
chr12 46553204 46554795 ZBTB33 GTRD no Brain (SK-N-SH) 21540746
chr12 46553205 46554581 ZBTB33 GTRD no Brain (SK-N-SH) 21540747
chr12 46553219 46553976 ZNF274 GTRD no Cervix (HeLa-S3) 21540748
chr12 46553231 46554636 ZNF274 GTRD no Cervix (HeLa-S3) 21540750
chr12 46553849 46554179 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21540762
chr12 46553874 46554133 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21540763
chr12 46553915 46554825 ZBTB33 GTRD no Brain (SK-N-SH) 21540764
chr12 46553917 46554553 ZBTB33 GTRD no Brain (SK-N-SH) 21540765
chr12 46553919 46554670 ZBTB33 GTRD no Brain (SK-N-SH) 21540766
chr12 46553938 46554427 ZBTB33 GTRD no Brain (SK-N-SH) 21540767
chr12 46553948 46553960 POU2F1 JASPAR yes 120599772
chr12 46553949 46553962 POU2F2 JASPAR yes 120599773
chr12 46553955 46553965 PAX3 JASPAR yes 120599775
chr12 46553955 46553965 PAX7 JASPAR yes 120599776
chr12 46553960 46553971 CEBPB JASPAR yes 120599777
Genes associated with rs146851728[chr12:46553960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More