EnhancerDB
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  3. rs147055424[chr2:236413385]
Enhancers that have rs147055424[chr2:236413385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs147055424[chr2:236413385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236413372 236413386 PAX6 JASPAR yes 81975258
chr2 236413381 236413385 YY1 TRANSFAC yes 81975259
chr2 236413382 236413392 HOXC10 JASPAR yes 81975260
chr2 236413382 236413392 HOXD11 JASPAR yes 81975261
chr2 236413382 236413392 HOXD13 JASPAR yes 81975262
chr2 236413382 236413393 HOXA10 JASPAR yes 81975263
chr2 236413382 236413393 HOXC11 JASPAR yes 81975264
chr2 236413382 236413393 HOXC12 JASPAR yes 81975265
chr2 236413382 236413393 HOXC13 JASPAR yes 81975266
chr2 236413382 236413393 HOXD12 JASPAR yes 81975267
chr2 236413383 236413392 CDX1 JASPAR yes 81975268
chr2 236413383 236413394 CDX2 JASPAR yes 81975269
Genes associated with rs147055424[chr2:236413385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More