EnhancerDB
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  3. rs147089845[chr1:202031787]
Enhancers that have rs147089845[chr1:202031787]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs147089845[chr1:202031787]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202031265 202032047 ZNF143 GTRD no Epithelial (MCF-7) 21366208
chr1 202031301 202032120 ZNF274 GTRD no Bone Marrow (K562) 21366209
chr1 202031415 202031945 ZNF143 GTRD no Epithelial (MCF-7) 21366210
chr1 202031644 202032267 ZNF274 GTRD no Liver (HepG2) 21366211
chr1 202031672 202032291 ZNF274 GTRD no Liver (HepG2) 21366212
chr1 202031687 202032225 ZNF274 GTRD no Liver (HepG2) 21366213
chr1 202031700 202032341 ZNF274 GTRD no Liver (HepG2) 21366214
chr1 202031786 202031791 GATA2 JASPAR yes 34548083
Genes associated with rs147089845[chr1:202031787], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 201865580 201915715 - LMOD1 ENSG00000163431.11 201915715 116072 Liver 0.315693 1713