EnhancerDB
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  3. rs147097020[chr1:23918378]
Enhancers that have rs147097020[chr1:23918378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr1 23918101 23918449 vista753
VISTA
Transcript factors that have rs147097020[chr1:23918378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23917962 23918482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802431
chr1 23918373 23918379 SP1 TRANSFAC yes 27444628
chr1 23918373 23918379 SP1 TRANSFAC yes 118249976
chr1 23918374 23918379 SP1 TRANSFAC yes 27444629
chr1 23918374 23918379 SP1 TRANSFAC yes 118249977
chr1 23918375 23918380 SP1 TRANSFAC yes 27444630
chr1 23918375 23918380 SP1 TRANSFAC yes 118249978
chr1 23918375 23918384 THAP1 JASPAR yes 27444631
chr1 23918375 23918384 THAP1 JASPAR yes 118249979
chr1 23918378 23918382 LFA1 TRANSFAC yes 27444632
chr1 23918378 23918382 LFA1 TRANSFAC yes 118249980
Genes associated with rs147097020[chr1:23918378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More