EnhancerDB
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  3. rs147178590[chr11:12776117]
Enhancers that have rs147178590[chr11:12776117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12762585 12780675 enh28602
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs147178590[chr11:12776117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12776106 12776122 ZNF143 JASPAR yes 37472994
chr11 12776108 12776123 RUNX2 JASPAR yes 37472995
chr11 12776111 12776122 RUNX1 JASPAR yes 37472996
chr11 12776112 12776122 RUNX3 JASPAR yes 37472997
chr11 12776113 12776122 RUNX2 JASPAR yes 37472998
chr11 12776115 12776130 STAT2 JASPAR yes 37472999
chr11 12776116 12776130 STAT1 JASPAR yes 37473000
chr11 12776117 12776129 IRF1 JASPAR yes 37473001
Genes associated with rs147178590[chr11:12776117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More