EnhancerDB
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  3. rs1475355[chr6:12052471]
Enhancers that have rs1475355[chr6:12052471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12042640 12055275 enh8953
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs1475355[chr6:12052471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12052458 12052473 FOXA1 JASPAR yes 99940908
chr6 12052460 12052472 FOXC2 JASPAR yes 99940909
chr6 12052461 12052472 FOXB1 JASPAR yes 99940910
chr6 12052461 12052472 FOXC1 JASPAR yes 99940911
chr6 12052462 12052473 FOXA1 JASPAR yes 99940913
Genes associated with rs1475355[chr6:12052471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More