EnhancerDB
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  3. rs1476242[chr1:12230549]
Enhancers that have rs1476242[chr1:12230549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12228245 12248275 enh11508
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Pancreas Uterus Thymus Heart
Transcript factors that have rs1476242[chr1:12230549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12228999 12231813 ZNF274 GTRD no Bone Marrow (K562) 107802102
chr1 12230534 12230553 REST JASPAR yes 26805546
chr1 12230538 12230553 RFX5 JASPAR yes 26805548
chr1 12230541 12230562 REST JASPAR yes 26805549
chr1 12230542 12230561 REST JASPAR yes 26805550
chr1 12230543 12230555 PKNOX1 JASPAR yes 26805551
chr1 12230543 12230555 PKNOX2 JASPAR yes 26805552
chr1 12230543 12230555 TGIF1 JASPAR yes 26805553
chr1 12230543 12230555 TGIF2 JASPAR yes 26805554
chr1 12230544 12230554 ID4 JASPAR yes 26805555
chr1 12230544 12230554 TCF4 JASPAR yes 26805556
chr1 12230546 12230551 USF2 TRANSFAC yes 26805557
Genes associated with rs1476242[chr1:12230549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More