EnhancerDB
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  3. rs147756990[chr1:16442245]
Enhancers that have rs147756990[chr1:16442245]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16434153 16452566 enh26556
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs147756990[chr1:16442245]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16439954 16443334 ZNF274 GTRD no Blood (GM12878) 107802219
chr1 16442239 16442250 NFKB1 JASPAR yes 27026282
chr1 16442240 16442251 NFKB1 JASPAR yes 27026283
chr1 16442242 16442257 TFAP2A JASPAR yes 27026284
chr1 16442242 16442257 TFAP2C JASPAR yes 27026285
chr1 16442243 16442258 ZIC3 JASPAR yes 27026286
chr1 16442243 16442258 ZIC4 JASPAR yes 27026287
chr1 16442244 16442257 TFAP2A JASPAR yes 27026288
chr1 16442244 16442257 TFAP2B JASPAR yes 27026289
chr1 16442244 16442257 TFAP2C JASPAR yes 27026290
chr1 16442245 16442256 EBF1 JASPAR yes 27026291
chr1 16442245 16442257 TFAP2A JASPAR yes 27026292
chr1 16442245 16442257 TFAP2B JASPAR yes 27026293
chr1 16442245 16442257 TFAP2C JASPAR yes 27026294
Genes associated with rs147756990[chr1:16442245], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 15764935 15775737 + CTRC ENSG00000162438.7 15764935 666508 Ovary 0.422259 206