EnhancerDB
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  3. rs1478599[chr2:218205827]
Enhancers that have rs1478599[chr2:218205827]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 218190625 218207195 enh19226
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Lung (PC-9) Brain (SK-N-MC) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs1478599[chr2:218205827]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 218205812 218205828 POU4F2 JASPAR yes 80930154
chr2 218205812 218205828 POU4F3 JASPAR yes 80930155
chr2 218205816 218205829 DUXA JASPAR yes 80930178
chr2 218205816 218205830 POU4F1 JASPAR yes 80930179
chr2 218205817 218205827 PAX3 JASPAR yes 80930180
chr2 218205817 218205827 PAX7 JASPAR yes 80930181
chr2 218205817 218205828 DUX4 JASPAR yes 80930182
chr2 218205817 218205828 PHOX2A JASPAR yes 80930183
chr2 218205817 218205828 PROP1 JASPAR yes 80930184
chr2 218205819 218205833 POU4F1 JASPAR yes 80930185
chr2 218205821 218205832 PHOX2A JASPAR yes 80930186
chr2 218205821 218205832 PROP1 JASPAR yes 80930187
chr2 218205823 218205835 FOXI1 JASPAR yes 80930188
chr2 218205823 218205837 POU4F1 JASPAR yes 80930189
chr2 218205823 218205838 FOXP1 JASPAR yes 80930190
chr2 218205823 218205838 HNF1A JASPAR yes 80930191
chr2 218205824 218205836 FOXC2 JASPAR yes 80930192
chr2 218205824 218205838 ONECUT2 JASPAR yes 80930193
chr2 218205824 218205838 ONECUT3 JASPAR yes 80930194
chr2 218205825 218205836 FOXB1 JASPAR yes 80930195
chr2 218205825 218205836 FOXC1 JASPAR yes 80930196
chr2 218205825 218205836 PROP1 JASPAR yes 80930197
chr2 218205825 218205841 POU4F2 JASPAR yes 80930198
chr2 218205825 218205841 POU4F3 JASPAR yes 80930199
chr2 218205826 218205830 YY1 TRANSFAC yes 80930200
chr2 218205826 218205841 FOXA1 JASPAR yes 80930201
chr2 218205827 218205839 FOXI1 JASPAR yes 80930202
chr2 218205827 218205841 POU4F1 JASPAR yes 80930203
chr2 218205827 218205842 FOXP1 JASPAR yes 80930204
chr2 218205827 218205842 HNF1A JASPAR yes 80930205
Genes associated with rs1478599[chr2:218205827], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More