EnhancerDB
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  3. rs147879709[chr1:9620935]
Enhancers that have rs147879709[chr1:9620935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs147879709[chr1:9620935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9620920 9620935 FOXA1 JASPAR yes 26662236
chr1 9620924 9620935 FOXA1 JASPAR yes 26662238
chr1 9620934 9620940 TBP TRANSFAC yes 26662239
chr1 9620935 9620947 FOXC2 JASPAR yes 26662240
Genes associated with rs147879709[chr1:9620935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More